skip to primary navigationskip to content
 

Network Visualisation and Analysis of Biological Data

When Apr 14, 2016 09:30 AM to
Apr 15, 2016 05:30 PM
Where Bioinformatics Training Room, Craik-Marshall Building, Downing Site
Add event to calendar vCal
iCal

This two day course will cover network-based approaches to visualise and analyse complex biological ‘big’ data and model pathway systems. The course will be centred on the use of BioLayout Express3D, a tool developed between scientists at the University of Edinburgh and EBI over the last 10 years.

BioLayout provides rapid and versatile means to explore and integrate very large datasets, providing a stunning interface to visualise the relationships between 10’s of thousands of data points. Originally designed for the analysis of microarray data, it is equally effective in analysing data matrices from other analysis platforms.

Day one of the course will introduce principles of network analysis and their use as a generic medium to understand relationships between entities. We will introduce the basics of network visualisation and navigation within BioLayout and principles of correlation analysis of data matrices. We will then explore how data can be explored and clustered within the tool and how you can use the software to rapidly extract meaning from large and complex datasets.

Day two will focus on pathway modelling. We will explain how to collate information about a given system of interest from the literature, and to turn this information into a logic-based pathway model. We will then explore how these models can be parametrised and imported into BioLayout where simulations can be run that model the dynamics of these systems under different conditions. For more information see: http://www.virtuallyimmune.org/

A draft agenda can be found here.

Click here to book

OPdA Tweets

Upcoming events

Women in STEMM Media Training

Jul 04, 2018

The Old Schools, Trinity Lane

BBSRC Open Meeting

Jul 05, 2018

Sainsbury Laboratory Auditorium

Upcoming events

RSS Feed Latest news

i-Teams call for projects 2018-19

Jun 18, 2018

Are you thinking about commercialising your research, or interested in investigating new uses for it? Then i-Teams can help!

Entrepreneurship trip to Argentina - apply by 25 June

Jun 18, 2018

Are you a PhD student or a postdoc running a successful technological startup? Global Shapers will cover a trip and accommodation to share your entrepreneurial experience in Argentina.

Join the Shaping Horizons 2019 organising committee - apply by 17 June

Jun 05, 2018

The Shaping Horizons 2019 organising committee are looking for motivated PhD students and postdocs to join them in creating a unique event that will bring together leaders from the UK and Latin America to discuss pressing challenges and promote diplomatic ties.

View all news